DETERMINATION OF DEFOCUS GRADIENT DIRECTION, V1.O (Aug-2009)
============================================================

Input tilt-series file name:
 /gpfs/appion/jchase/16sep28d/protomo_alignments/tiltseries0007/defocus_estimation/stack_for_defocus_estimation.mrcs

Input tilt-angles file name:
 /gpfs/appion/jchase/16sep28d/protomo_alignments/tiltseries0007/defocus_estimation/series0007_tilts_negative.txt

Output diagnostic file name:
 /gpfs/appion/jchase/16sep28d/protomo_alignments/tiltseries0007/defocus_estimation//diagnostic_negative.mrc

Tile size:
 384

Input CTF parameters:
 CS[mm],  HT[kV],  AmpCnst,  XMAG,  DStep[um]:
  2.7,    300.0,     0.07,  10000.0,    1.8
                    Angstroms/Pixel:  1.76

Input Fitting parameters:
 CTFMin[0,1], ResMin[A], ResMax[A]:
         0.5,  100000.00,       7.1
 dFMin[A],   dFMax[A],    FStep:
  24000.0,   36000.00,    500.0

Summary of defocus gradients:
=============================
 Image    TiltAngle       DF-left*    DF-center*    DF-right*
-------------------------------------------------------------
    0        33.0         36000.0      34500.0      33000.0 
    1        30.0         36000.0      34000.0      33000.0 
    2        27.0         34000.0      33000.0      32000.0 
    3        24.0         34000.0      32000.0      31000.0 
    4        21.0         32000.0      31500.0      30500.0 
    5        15.0         30500.0      30500.0      28500.0 
    6        12.0         28500.0      30500.0      29500.0 
    7         9.0         29000.0      28500.0      29500.0 
    8         6.0         29000.0      29000.0      28500.0 
    9         3.0         28500.0      28500.0      28500.0 
   10        -0.1         28500.0      28500.0      28500.0 
   11        -3.0         28500.0      28500.0      28500.0 
   12        -6.0         27500.0      28500.0      28500.0 
   13        -9.0         28000.0      28000.0      28500.0 
   14       -12.0         29000.0      27500.0      28000.0 
   15       -15.0         27000.0      27000.0      27000.0 
   16       -18.0         26500.0      26500.0      28000.0 
   17       -21.0         25000.0      26000.0      27500.0 
   18       -24.0         25000.0      25500.0      26000.0 
   19       -27.0         24000.0      25500.0      28500.0 
   20       -30.0         32500.0      24500.0      26500.0 
   21       -33.0         36000.0      24000.0      26500.0 
   22       -36.0         35000.0      24000.0      25500.0 
   23       -39.0         31500.0      24500.0      25000.0 
   24       -42.0         33500.0      26500.0      24500.0 
-------------------------------------------------------------
          * Approx. DF values corresponding to the X columns:
                            left        center        right
                             384         1920         3456
-------------------------------------------------------------


    Tilt angles NOT according to the convention used in TOMOCTF:
        Please, change the sign of tilt angles to follow the convention:
        Images with positive tilt angle must have
        increasing underfocus magnitude with the X axis (left to right)