DETERMINATION OF DEFOCUS GRADIENT DIRECTION, V1.O (Aug-2009)
============================================================

Input tilt-series file name:
 /gpfs/appion/anoble/17jul05d/protomo_alignments/tiltseries0002/defocus_estimation/stack_for_defocus_estimation.mrcs

Input tilt-angles file name:
 /gpfs/appion/anoble/17jul05d/protomo_alignments/tiltseries0002/defocus_estimation/series0002_tilts_negative.txt

Output diagnostic file name:
 /gpfs/appion/anoble/17jul05d/protomo_alignments/tiltseries0002/defocus_estimation//diagnostic_negative.mrc

Tile size:
 384

Input CTF parameters:
 CS[mm],  HT[kV],  AmpCnst,  XMAG,  DStep[um]:
  0.0,    300.0,     0.07,  10000.0,    1.8
                    Angstroms/Pixel:  1.84

Input Fitting parameters:
 CTFMin[0,1], ResMin[A], ResMax[A]:
         0.5,  100000.00,       7.3
 dFMin[A],   dFMax[A],    FStep:
  36000.0,   54000.00,    500.0

Summary of defocus gradients:
=============================
 Image    TiltAngle       DF-left*    DF-center*    DF-right*
-------------------------------------------------------------
    0        45.0         37000.0      50500.0      46000.0 
    1        42.0         45500.0      40000.0      36000.0 
    2        39.0         37000.0      45500.0      45500.0 
    3        36.0         36000.0      36500.0      44500.0 
    4        33.0         39500.0      37500.0      53500.0 
    5        30.0         39500.0      38500.0      48000.0 
    6        27.0         37000.0      37000.0      39500.0 
    7        24.0         52500.0      45500.0      36000.0 
    8        21.0         36500.0      42500.0      51000.0 
    9        18.0         54000.0      41000.0      36500.0 
   10        15.0         38500.0      41500.0      37500.0 
   11        12.0         41500.0      36000.0      38000.0 
   12         9.0         41500.0      38000.0      37000.0 
   13         6.0         53500.0      44000.0      41500.0 
   14         3.0         45500.0      38000.0      38500.0 
   15         0.1         42000.0      41500.0      38500.0 
   16        -0.1         39000.0      37000.0      44500.0 
   17        -3.0         49000.0      50000.0      54000.0 
   18        -6.0         38000.0      53500.0      48500.0 
   19        -9.0         36000.0      49000.0      41500.0 
   20       -12.0         45500.0      44500.0      45000.0 
   21       -15.0         38000.0      37500.0      54000.0 
   22       -18.0         37500.0      54000.0      54000.0 
   23       -21.0         43000.0      38500.0      39500.0 
   24       -24.0         54000.0      39500.0      54000.0 
   25       -27.0         54000.0      37500.0      36000.0 
   26       -30.0         41000.0      49000.0      36500.0 
   27       -33.0         53500.0      41500.0      37000.0 
   28       -36.0         51500.0      36000.0      36000.0 
   29       -39.0         54000.0      41500.0      42500.0 
   30       -42.0         54000.0      38000.0      36500.0 
   31       -45.0         48000.0      49000.0      40500.0 
-------------------------------------------------------------
          * Approx. DF values corresponding to the X columns:
                            left        center        right
                             384         1920         3456
-------------------------------------------------------------


    Tilt angles are according to the convention used in TOMOCTF:
        i.e., images with positive tilt angle have
        increasing underfocus magnitude with the X axis (left to right)