DETERMINATION OF DEFOCUS GRADIENT DIRECTION, V1.O (Aug-2009)
============================================================

Input tilt-series file name:
 /gpfs/appion/anoble/17jul05d/protomo_alignments/tiltseries0007_thick300/defocus_estimation/stack_for_defocus_estimation.mrcs

Input tilt-angles file name:
 /gpfs/appion/anoble/17jul05d/protomo_alignments/tiltseries0007_thick300/defocus_estimation/series0007_tilts.txt

Output diagnostic file name:
 /gpfs/appion/anoble/17jul05d/protomo_alignments/tiltseries0007_thick300/defocus_estimation//diagnostic.mrc

Tile size:
 384

Input CTF parameters:
 CS[mm],  HT[kV],  AmpCnst,  XMAG,  DStep[um]:
  0.0,    300.0,     0.07,  10000.0,    1.8
                    Angstroms/Pixel:  1.84

Input Fitting parameters:
 CTFMin[0,1], ResMin[A], ResMax[A]:
         0.5,  100000.00,       7.3
 dFMin[A],   dFMax[A],    FStep:
  84000.0,   126000.00,    500.0

Summary of defocus gradients:
=============================
 Image    TiltAngle       DF-left*    DF-center*    DF-right*
-------------------------------------------------------------
    0       -42.0        108000.0     106500.0     103500.0 
    1       -39.0        108000.0     106500.0      94500.0 
    2       -36.0        109000.0     105000.0     105000.0 
    3       -33.0        108000.0     108500.0     101500.0 
    4       -30.0        109500.0     106000.0     105000.0 
    5       -27.0        108500.0     105000.0      96500.0 
    6       -24.0        108500.0     107500.0     110500.0 
    7       -21.0        101000.0     109500.0     100500.0 
    8       -18.0        110000.0     104000.0     106500.0 
    9       -15.0        109000.0     100500.0     106500.0 
   10       -12.0        112000.0     109000.0      93500.0 
   11        -9.0        111000.0     108000.0     108500.0 
   12        -6.0        111500.0     108000.0      85000.0 
   13        -3.0        112500.0     108500.0     104000.0 
   14        -0.1        112000.0     108500.0      92500.0 
   15         0.1        109000.0     109500.0     111000.0 
   16         3.0        110500.0     109000.0     109000.0 
   17         6.0        110000.0     107500.0     115000.0 
   18         9.0        114000.0     107500.0     109500.0 
   19        12.0         97000.0     108500.0     115500.0 
   20        15.0        108000.0     110500.0     113500.0 
   21        18.0        107000.0     110000.0     109500.0 
   22        21.0        107500.0     111000.0     116000.0 
   23        24.0        108500.0     109500.0     109000.0 
   24        27.0        106500.0     106500.0      94000.0 
   25        30.0        105000.0     108000.0     104500.0 
   26        33.0        107000.0     106000.0     107500.0 
   27        36.0        105000.0     107500.0     111000.0 
   28        39.0        104000.0     108000.0     112000.0 
   29        42.0         98500.0     108000.0     108000.0 
-------------------------------------------------------------
          * Approx. DF values corresponding to the X columns:
                            left        center        right
                             384         1920         3456
-------------------------------------------------------------


    Tilt angles are according to the convention used in TOMOCTF:
        i.e., images with positive tilt angle have
        increasing underfocus magnitude with the X axis (left to right)