DETERMINATION OF DEFOCUS GRADIENT DIRECTION, V1.O (Aug-2009) ============================================================ Input tilt-series file name: /gpfs/appion/jbrasch/19feb06g/protomo_alignments/tiltseries0015/defocus_estimation/stack_for_defocus_estimation.mrcs Input tilt-angles file name: /gpfs/appion/jbrasch/19feb06g/protomo_alignments/tiltseries0015/defocus_estimation/series0015_tilts.txt Output diagnostic file name: /gpfs/appion/jbrasch/19feb06g/protomo_alignments/tiltseries0015/defocus_estimation//diagnostic.mrc Tile size: 384 Input CTF parameters: CS[mm], HT[kV], AmpCnst, XMAG, DStep[um]: 0.0, 300.0, 0.07, 10000.0, 2.8 Angstroms/Pixel: 2.80 Input Fitting parameters: CTFMin[0,1], ResMin[A], ResMax[A]: 0.5, 100000.00, 11.2 dFMin[A], dFMax[A], FStep: 32168.3, 48252.48, 500.0 Summary of defocus gradients: ============================= Image TiltAngle DF-left* DF-center* DF-right* ------------------------------------------------------------- 0 -44.5 41500.0 32000.0 48000.0 1 -42.2 34000.0 35000.0 34500.0 2 -39.9 46500.0 38500.0 32000.0 3 -37.6 40500.0 37500.0 33000.0 4 -35.3 39000.0 38500.0 33500.0 5 -33.0 35500.0 37500.0 36500.0 6 -30.7 43000.0 36000.0 36500.0 7 -28.4 32000.0 38500.0 37500.0 8 -26.1 35500.0 37500.0 44000.0 9 -23.8 33500.0 36500.0 41500.0 10 -21.5 32000.0 36000.0 35500.0 11 -19.2 32000.0 41500.0 37000.0 12 -16.9 44000.0 38500.0 38500.0 13 -14.6 32000.0 36000.0 34500.0 14 -12.3 38500.0 40000.0 33000.0 15 -10.0 32000.0 37000.0 42000.0 16 -10.0 41000.0 32000.0 33500.0 17 -7.7 38500.0 32000.0 32000.0 18 -5.4 32500.0 38000.0 37000.0 19 -3.1 35000.0 32000.0 37500.0 20 -0.8 33500.0 32000.0 35000.0 21 1.5 38500.0 41500.0 33500.0 22 3.8 42000.0 34500.0 32000.0 23 6.1 39000.0 39000.0 39000.0 24 8.4 35000.0 35500.0 33000.0 25 10.7 38500.0 36500.0 36000.0 26 13.0 34500.0 35500.0 32000.0 27 15.3 38500.0 36000.0 37500.0 28 17.6 33000.0 36000.0 32000.0 29 19.9 35000.0 32000.0 43500.0 30 22.2 33500.0 35000.0 35000.0 31 24.5 38500.0 35000.0 38500.0 32 26.8 38000.0 36000.0 33000.0 33 29.1 34000.0 38500.0 44000.0 34 31.4 32000.0 35000.0 39000.0 35 33.7 35500.0 35500.0 36000.0 36 36.0 36000.0 35000.0 36000.0 37 38.3 37000.0 35000.0 35000.0 38 40.6 33000.0 32000.0 41000.0 39 42.9 33500.0 40000.0 44000.0 40 45.2 37000.0 36000.0 33000.0 41 47.5 48000.0 43500.0 46000.0 42 49.8 37000.0 32000.0 32500.0 43 52.1 36000.0 34000.0 39500.0 44 54.4 39000.0 32500.0 46500.0 45 56.7 33500.0 37000.0 37000.0 46 59.0 33500.0 33000.0 35500.0 ------------------------------------------------------------- * Approx. DF values corresponding to the X columns: left center right 384 1920 3456 ------------------------------------------------------------- Tilt angles are according to the convention used in TOMOCTF: i.e., images with positive tilt angle have increasing underfocus magnitude with the X axis (left to right) 115.308u 1.155s 1:56.85 99.6% 0+0k 0+0io 0pf+0w