REL 2019-11-19 2023-10-17 2023-10-17 Soft X-ray Cryo Tomography of Trypanosoma 0000-0002-8438-1415 Mark Basham Diamond Light Source Oxford United Kingdom OX11 ODE 0000-0002-8438-1415 Mark Basham Diamond Light Source Oxford United Kingdom OX11 ODE Darrow MC 1.5 10.6019/EMPIAR-10484 SXT organism Luengo I Darrow MC Spink MC Sun Y Dai W He CY Chiu W Pridmore T Ashton AW Duke EMH Basham M French AP SuRVoS: Super-Region Volume Segmentation workbench Journal of structural biology J. Struct. Biol. 1 198 43 53 2017 English 10.1016/j.jsb.2017.02.007 28246039
Soft X-ray Cryo Tomogramphy of Trypanosoma
 Trypanosoma /data reconstructed volumes MRC MRC 180 1 UNSIGNED BYTE variable variable variable variable
The data.h5 file is the data output from SuRVoS. It is in the same orientation as the annotations. The Easy_Level*_Label*.rec files are the annotation output from SuRVoS. Each file is a different class of objects as arbitrarily defined by the annotator. They are all in the same orientations as the data.h5 file. The .mpg file is the movie showing these data that was provided for publication. It was created in Chimera. The movie is open access, but if made avaialble anywhere should indicate the publication it came from: Luengo, I., Darrow, M. C., Spink, M. C., Sun, Y., Dai, W., He, C. Y., et al. SuRVoS: Super-Region Volume Segmentation Workbench. J Struct Biol (198), doi: 10.1016/j.jsb.2017.02.007 (2017).
data/Level1_v2_label0.rec Each file is a different class of objects as arbitrarily defined by the annotator. data/Level1_v2_label1.rec Each file is a different class of objects as arbitrarily defined by the annotator. data/Level2_label0.rec Each file is a different class of objects as arbitrarily defined by the annotator. data/Level2_label1.rec Each file is a different class of objects as arbitrarily defined by the annotator. data/Level2_label2.rec Each file is a different class of objects as arbitrarily defined by the annotator. data/Level2_label4.rec Each file is a different class of objects as arbitrarily defined by the annotator. data/Level2_label5.rec Each file is a different class of objects as arbitrarily defined by the annotator. data/Level2_label6.rec Each file is a different class of objects as arbitrarily defined by the annotator. data/Level2_label7.rec Each file is a different class of objects as arbitrarily defined by the annotator.