*** Entries to program alignframes ***
  InputFile = 2-g1_10001.tif
  OutputImageFile = Y:/Kenji_Upenn/Rina_20200304/2-g1_10001_ali.mrc
  AlignAndSumBinning = 10 2
  ScalingOfSum = 32.000000
  GainReferenceFile = SuperRef_2-g1_00000.dm4
  RotationAndFlip = -1
  PairwiseFrames = 7
  ShiftLimit = 20
  GroupSize = 1
  FilterRadius2 = 0.050000
  VaryFilter = 0.050000
  RefineAlignment = 0
  StopIterationsAtShift = 0.100000
  MinForSplineSmoothing = 0
  UseGPU = 0
  FixedTotalDose = 45.1
  AntialiasFilter = 4
  FilterSigma2 = 0.007145
*** End of entries ***

File 1 (2-g1_10001.tif): 30 frames
  Weighted residual mean = 0.309, SD = 0.155, mean max = 0.52, max max = 0.72
  Max unweighted resid mean = 1.27, max = 1.93   Dist = 11.35, smoothed = 5.27
 FRC crossings 0.5: 0.0380  0.25: 0.0462  0.125: 0.0497  is 0.0783 at 0.25/pix
SUCCESSFULLY COMPLETED