++++ Executing new job on Sat Oct 16 14:57:12 2021 ++++ with the following command(s): `which relion_mask_create` --i Refine3D/job219/run_class001.mrc --o MaskCreate/job221/mask.mrc --lowpass 15 --ini_threshold 0.001 --extend_inimask 5 --width_soft_edge 7 --j 12 --pipeline_control MaskCreate/job221/ ++++ ++++ Executing new job on Sat Oct 16 14:58:37 2021 ++++ with the following command(s): `which relion_mask_create` --i Refine3D/job219/run_class001.mrc --o MaskCreate/job221/mask.mrc --lowpass 15 --ini_threshold 0.0005 --extend_inimask 5 --width_soft_edge 7 --j 12 --pipeline_control MaskCreate/job221/ ++++ ++++ Executing new job on Sat Oct 16 15:03:00 2021 ++++ with the following command(s): `which relion_mask_create` --i Refine3D/job219/run_class001.mrc --o MaskCreate/job221/mask.mrc --lowpass 15 --ini_threshold 0.0003 --extend_inimask 5 --width_soft_edge 7 --j 12 --pipeline_control MaskCreate/job221/ ++++ ++++ Executing new job on Sat Oct 16 15:05:29 2021 ++++ with the following command(s): `which relion_mask_create` --i Refine3D/job219/run_class001.mrc --o MaskCreate/job221/mask.mrc --lowpass 15 --ini_threshold 0.0003 --extend_inimask 5 --width_soft_edge 7 --helix --z_percentage 0.3 --j 12 --pipeline_control MaskCreate/job221/ ++++ ++++ Executing new job on Sat Oct 16 15:17:39 2021 ++++ with the following command(s): `which relion_mask_create` --i Refine3D/job219/run_class001.mrc --o MaskCreate/job221/mask.mrc --lowpass 15 --ini_threshold 0.0003 --extend_inimask 5 --width_soft_edge 7 --j 12 --pipeline_control MaskCreate/job221/ ++++