++++ Executing new job on Sat Sep  4 00:51:35 2021
 ++++ with the following command(s): 
`which relion_preprocess_mpi` --i CtfFind/job022/micrographs_ctf.star --coord_list ManualPick/job025/manualpick.star --part_star Extract/job026/particles.star --pick_star Extract/job026/extractpick.star --part_dir Extract/job026/ --extract --extract_size 480 --float16  --scale 160 --norm --bg_radius 73 --white_dust -1 --black_dust -1 --invert_contrast  --helix --helical_outer_diameter 200 --helical_bimodal_angular_priors --helical_tubes --helical_cut_into_segments --helical_nr_asu 3 --helical_rise 4.75  --pipeline_control Extract/job026/
 ++++ 

 ++++ Executing new job on Sat Sep  4 10:20:44 2021
 ++++ with the following command(s): 
`which relion_preprocess_mpi` --i CtfFind/job022/micrographs_ctf.star --coord_list ManualPick/job025/manualpick.star --part_star Extract/job026/particles.star --pick_star Extract/job026/extractpick.star --part_dir Extract/job026/ --extract --extract_size 480 --float16  --scale 160 --norm --bg_radius 73 --white_dust -1 --black_dust -1 --invert_contrast  --helix --helical_outer_diameter 200 --helical_bimodal_angular_priors --helical_tubes --helical_cut_into_segments --helical_nr_asu 3 --helical_rise 4.75 --only_do_unfinished   --pipeline_control Extract/job026/
 ++++ 

 ++++ Executing new job on Sat Sep  4 10:21:37 2021
 ++++ with the following command(s): 
`which relion_preprocess_mpi` --i CtfFind/job022/micrographs_ctf.star --coord_list ManualPick/job025/manualpick.star --part_star Extract/job026/particles.star --pick_star Extract/job026/extractpick.star --part_dir Extract/job026/ --extract --extract_size 480 --float16  --scale 160 --norm --bg_radius 73 --white_dust -1 --black_dust -1 --invert_contrast  --helix --helical_outer_diameter 200 --helical_bimodal_angular_priors --helical_tubes --helical_cut_into_segments --helical_nr_asu 3 --helical_rise 4.75 --only_do_unfinished   --pipeline_control Extract/job026/
 ++++