++++ Executing new job on Wed Dec 1 13:51:10 2021 ++++ with the following command(s): `which relion_refine_mpi` --o Refine3D/job099/run --auto_refine --split_random_halves --i Select/job083/particles.star --ref Class3D/job076/run_it020_class002.mrc --ini_high 4.5 --dont_combine_weights_via_disc --scratch_dir $RELION_SCRATCH_DIR --pool 30 --pad 2 --skip_gridding --ctf --particle_diameter 220 --flatten_solvent --zero_mask --oversampling 1 --healpix_order 3 --auto_local_healpix_order 4 --offset_range 5 --offset_step 2 --sym C1 --low_resol_join_halves 40 --norm --scale --helix --helical_outer_diameter 180 --helical_nr_asu 3 --helical_twist_initial -1.2 --helical_rise_initial 4.75 --helical_z_percentage 0.15 --sigma_tilt 5 --sigma_psi 3.33333 --sigma_rot 0 --helical_keep_tilt_prior_fixed --j 4 --pipeline_control Refine3D/job099/ ++++