# Created by the starfile Python package (version 0.4.11) at 16:33:02 on 03/05/2022

data_montage

loop_
_montage_filename #1
_matches_montage_filename #2
_montage_pixel_size #3
_montage_binning #4
_montage_x_size #5
_montage_y_size #6
/scratch/bern/elferich/deco_lace_manuscript_processing/refined_assembly_it2/fff_lamella1_montage_t2_highres.tif	/scratch/bern/elferich/deco_lace_manuscript_processing/refined_assembly_it2/fff_lamella1_matches_montage_t2_highres.tif	7.500210	5	10586	10714

data_tiles

loop_
_tile_filename #1
_tile_movie_filename #2
_tile_x_offset #3
_tile_y_offset #4
_tile_pixel_size #5
_tile_x_size #6
_tile_y_size #7
_tile_orig_x_size #8
_tile_orig_y_size #9
_tile_x_crop_center #10
_tile_y_crop_center #11
_tile_mask_filename #12
_tile_plotted_result_filename #13
_tile_image_shift_x #14
_tile_image_shift_y #15
_tile_microscope_focus #16
_tile_defocus #17
_include_in_refined #18
_tile_x_offset_original #19
_tile_y_offset_original #20
_tile_intensity_correction #21
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00043_-15.0_Nov08_11.55.27_44_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00043_-15.0_Nov08_11.55.27.tif	16441.083535	300.008400	1.500042	2698	3381	5120	3637	379	-113	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00043_-15.0_Nov08_11.55.27_44_1_mask.mrc	None	-0.451056	-4.123040	27.962700	11128.128906	True	16649.556662	2928.917250	1.812278
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00044_-15.0_Nov08_11.55.36_45_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00044_-15.0_Nov08_11.55.36.tif	19326.580407	487.769961	1.500042	3392	3393	5120	3637	-18	-22	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00044_-15.0_Nov08_11.55.36_45_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00044_-15.0_Nov08_11.55.36_45_0_plotted_result_45_0.mrc	-0.074365	-3.935970	28.285900	8088.941162	True	19551.553996	3121.178937	2.282302
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00045_-15.0_Nov08_11.55.44_46_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00045_-15.0_Nov08_11.55.44.tif	23385.821908	482.687516	1.500042	3399	3394	5120	3637	12	-54	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00045_-15.0_Nov08_11.55.44_46_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00045_-15.0_Nov08_11.55.44_46_0_plotted_result_46_0.mrc	0.302327	-3.748910	28.306200	7763.959717	True	23621.295791	3114.596450	2.212770
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00046_-15.0_Nov08_11.55.53_47_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00046_-15.0_Nov08_11.55.53.tif	27385.096718	533.196977	1.500042	3410	3397	5120	3637	4	-47	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00046_-15.0_Nov08_11.55.53_47_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00046_-15.0_Nov08_11.55.53_47_0_plotted_result_47_0.mrc	0.679018	-3.561840	28.292000	7807.156494	True	27628.070811	3163.605869	2.097281
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00047_-15.0_Nov08_11.56.01_48_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00047_-15.0_Nov08_11.56.01.tif	31534.736467	522.774859	1.500042	3412	3398	5120	3637	5	-46	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00047_-15.0_Nov08_11.56.01_48_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00047_-15.0_Nov08_11.56.01_48_0_plotted_result_48_0.mrc	1.055710	-3.374770	28.286000	7841.845215	True	31652.019957	3209.286681	2.071334
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00048_-15.0_Nov08_11.56.10_49_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00048_-15.0_Nov08_11.56.10.tif	35600.533119	562.761939	1.500042	3412	3397	5120	3637	3	-45	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00048_-15.0_Nov08_11.56.10_49_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00048_-15.0_Nov08_11.56.10_49_0_plotted_result_49_0.mrc	1.432400	-3.187710	28.282100	7869.757568	True	35677.774789	3261.837725	2.163694
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00049_-15.0_Nov08_11.56.18_50_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00049_-15.0_Nov08_11.56.18.tif	39633.862359	605.399852	1.500042	3422	3163	5120	3637	4	-170	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00049_-15.0_Nov08_11.56.18_50_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00049_-15.0_Nov08_11.56.18_50_0_plotted_result_50_0.mrc	1.809090	-3.000640	28.280100	7837.609863	True	39693.707803	3303.332317	1.700502
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00050_-15.0_Nov08_11.56.26_51_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00050_-15.0_Nov08_11.56.26.tif	43685.942128	651.037852	1.500042	3415	2921	5120	3637	4	-299	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00050_-15.0_Nov08_11.56.26_51_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00050_-15.0_Nov08_11.56.26_51_0_plotted_result_51_0.mrc	2.185780	-2.813570	28.275800	7956.616455	True	43725.391261	3353.827165	1.677843
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00051_-15.0_Nov08_11.56.35_52_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00051_-15.0_Nov08_11.56.35.tif	47718.394348	735.275657	1.500042	3412	3398	5120	3637	-2	-42	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00051_-15.0_Nov08_11.56.35_52_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00051_-15.0_Nov08_11.56.35_52_0_plotted_result_52_0.mrc	2.562470	-2.626500	28.283500	8128.257568	True	47776.448262	3448.921986	2.078007
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00052_-15.0_Nov08_11.56.43_53_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00052_-15.0_Nov08_11.56.43.tif	51764.888871	785.243045	1.500042	3411	3398	5120	3637	5	-48	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00052_-15.0_Nov08_11.56.43_53_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00052_-15.0_Nov08_11.56.43_53_0_plotted_result_53_0.mrc	2.939160	-2.439440	28.307500	8055.782959	True	51814.779121	3496.720643	2.072932
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00053_-15.0_Nov08_11.56.52_54_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00053_-15.0_Nov08_11.56.52.tif	55795.269656	850.436724	1.500042	3400	3396	5120	3637	-2	-48	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00053_-15.0_Nov08_11.56.52_54_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00053_-15.0_Nov08_11.56.52_54_0_plotted_result_54_0.mrc	3.315860	-2.252370	28.322600	8182.585449	True	55839.860376	3559.411396	2.126611
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00054_-15.0_Nov08_11.57.00_55_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00054_-15.0_Nov08_11.57.00.tif	59826.542901	919.535977	1.500042	3415	3398	5120	3637	4	-48	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00054_-15.0_Nov08_11.57.00_55_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00054_-15.0_Nov08_11.57.00_55_0_plotted_result_55_0.mrc	3.692550	-2.065300	28.349800	8216.843506	True	59870.696550	3624.388769	2.070559
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00055_-15.0_Nov08_11.57.09_56_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00055_-15.0_Nov08_11.57.09.tif	63921.257131	949.803735	1.500042	3365	3389	5120	3637	28	-47	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00055_-15.0_Nov08_11.57.09_56_1_mask.mrc	None	4.069240	-1.878240	28.381200	8311.117188	True	63961.565757	3663.353790	2.420743
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00059_-15.0_Nov08_11.57.42_60_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00059_-15.0_Nov08_11.57.42.tif	73952.768666	4667.245033	1.500042	2055	3284	5120	3637	-624	-76	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00059_-15.0_Nov08_11.57.42_60_1_mask.mrc	None	4.857480	-1.079410	28.393200	8947.222900	True	73972.302936	7372.487849	1.481608
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00060_-15.0_Nov08_11.57.51_61_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00060_-15.0_Nov08_11.57.51.tif	69877.522202	4733.478458	1.500042	3414	3390	5120	3637	14	61	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00060_-15.0_Nov08_11.57.51_61_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00060_-15.0_Nov08_11.57.51_61_0_plotted_result_61_0.mrc	4.480790	-1.266470	28.491300	7860.525635	True	69929.607104	7450.326898	2.186746
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00061_-15.0_Nov08_11.57.59_62_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00061_-15.0_Nov08_11.57.59.tif	65833.555584	4618.534413	1.500042	3402	3398	5120	3637	-4	42	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00061_-15.0_Nov08_11.57.59_62_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00061_-15.0_Nov08_11.57.59_62_0_plotted_result_62_0.mrc	4.104100	-1.453540	28.487900	7560.355469	True	65887.837454	7335.395066	1.856987
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00062_-15.0_Nov08_11.58.07_63_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00062_-15.0_Nov08_11.58.07.tif	61849.730861	4683.239210	1.500042	3414	3342	5120	3637	9	88	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00062_-15.0_Nov08_11.58.07_63_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00062_-15.0_Nov08_11.58.07_63_0_plotted_result_63_0.mrc	3.727410	-1.640610	28.457400	7453.740234	True	61881.221472	7391.675637	1.866618
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00063_-15.0_Nov08_11.58.16_64_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00063_-15.0_Nov08_11.58.16.tif	57816.792768	4538.041737	1.500042	3413	3393	5120	3637	10	50	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00063_-15.0_Nov08_11.58.16_64_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00063_-15.0_Nov08_11.58.16_64_0_plotted_result_64_0.mrc	3.350720	-1.827670	28.423400	7479.133057	True	57857.516861	7247.492340	2.002504
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00064_-15.0_Nov08_11.58.24_65_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00064_-15.0_Nov08_11.58.24.tif	53781.383356	4482.313948	1.500042	3414	3392	5120	3637	9	53	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00064_-15.0_Nov08_11.58.24_65_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00064_-15.0_Nov08_11.58.24_65_0_plotted_result_65_0.mrc	2.974020	-2.014740	28.378800	7677.508301	True	53826.478285	7193.931683	2.035173
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00065_-15.0_Nov08_11.58.33_66_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00065_-15.0_Nov08_11.58.33.tif	49747.844513	4423.294345	1.500042	3415	3393	5120	3637	9	52	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00065_-15.0_Nov08_11.58.33_66_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00065_-15.0_Nov08_11.58.33_66_0_plotted_result_66_0.mrc	2.597330	-2.201810	28.356500	7702.836670	True	49796.665865	7136.466042	2.045076
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00066_-15.0_Nov08_11.58.41_67_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00066_-15.0_Nov08_11.58.41.tif	45712.748547	4364.186620	1.500042	3414	3394	5120	3637	8	52	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00066_-15.0_Nov08_11.58.41_67_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00066_-15.0_Nov08_11.58.41_67_0_plotted_result_67_0.mrc	2.220640	-2.388870	28.338600	7691.820312	True	45762.718232	7079.083202	2.055617
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00067_-15.0_Nov08_11.58.50_68_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00067_-15.0_Nov08_11.58.50.tif	41680.033816	4310.671638	1.500042	3415	3395	5120	3637	8	53	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00067_-15.0_Nov08_11.58.50_68_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00067_-15.0_Nov08_11.58.50_68_0_plotted_result_68_0.mrc	1.843950	-2.575940	28.323200	7740.876221	True	41732.465458	7025.601072	2.043855
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00068_-15.0_Nov08_11.58.58_69_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00068_-15.0_Nov08_11.58.58.tif	37644.224415	4258.991433	1.500042	3415	3395	5120	3637	8	53	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00068_-15.0_Nov08_11.58.58_69_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00068_-15.0_Nov08_11.58.58_69_0_plotted_result_69_0.mrc	1.467260	-2.763010	28.310300	7775.796631	True	37706.395371	6969.228906	2.055570
/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00069_-15.0_Nov08_11.59.07_70_0.mrc	/data/elferich/CryoTEM/Johannes_20211108/grid2/lamella1/frames/s_lam_00069_-15.0_Nov08_11.59.07.tif	33606.307410	4206.772635	1.500042	3415	3395	5120	3637	8	53	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/Images/s_lam_00069_-15.0_Nov08_11.59.07_70_1_mask.mrc	/scratch/bern/elferich/R_Hox_120h_20211108_g2_l1/Assets/TemplateMatching/s_lam_00069_-15.0_Nov08_11.59.07_70_0_plotted_result_70_0.mrc	1.090570	-2.950080	28.300000	7821.627686	True	33677.474243	6912.894144	2.043350
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