REL 2024-04-09 2024-04-09 2025-02-28 0000-0003-2020-3561 Sagar Khavnekar 1 Max Plank Institute of Biochemistry, 2 Thermo Fisher Scientific Eindhoven Netherlands 5651 0000-0003-2020-3561 Sagar Khavnekar 1 Max Plank Institute of Biochemistry, 2 Thermo Fisher Scientific Eindhoven Netherlands 5651 Kelley R Khavnekar S Zhang X Obr M Chakraborty S Koh AF Heebner J Righetto R Waltz F McCafferty C Van den Hoek H Wietrzynski W Van Der Stappen P Michael A Van Dorst S Tagiltsev G Beck F Zhong E Wan W Briggs J Plitzko J Engel B Kotecha A 32.1 10.6019/EMPIAR-11830 EMDB cell EMD-18306 Kelley R Khavnekar S Righetto RD Heebner J Obr M Zhang X Chakraborty S Tagiltsev G Michael AK van Dorst S Waltz F McCafferty CL Lamm L Zufferey S Van der Stappen P van den Hoek H Wietrzynski W Harar P Wan W Briggs JA Plitzko JM Engel BD Kotecha A bioRxiv 2024 English 10.1101/2024.12.28.630444 Khavnekar S Kelley R Waltz F Wietrzynski W Zhang X Obr M Tagiltsev G Beck F Wan W Briggs JA Engel BD Plitzko JM Kotecha A Towards the Visual Proteomics of C. reinhardtii using High-throughput Collaborative in situ Cryo-ET 10.1093/micmic/ozad067.480 37613825 Chlamy Visual proteomics project containing 1829 tilt series and preprocessed metadata for C. reinhardtii prepared using cryo-plasmaFIB milling /data/chlamy_visual_proteomics tilt series EER EER 1829 0 UNSIGNED 32 BIT INTEGER 4096 1.96 4096 1.96

A Minimal TOMOMAN (https://doi.org/10.1093/micmic/ozad067.516) project.

Chlamy Visual proteomics denoised tomograms /data/cryocare_bin4 reconstructed volumes MRC MRC 1829 1 32 BIT FLOAT 1024 7.84 1024 7.84

Denoised using CryoCARE by using workflow implemented in TOMOMAN

Chlamy Visual proteomics 3D CTF-corrected tomograms /data/ctf3d_bin4 reconstructed volumes MRC MRC 1829 1 SIGNED 16 BIT INTEGER 1024 7.84 1024 7.84

3D CTF-corrected tomograms calculated with IMOD.