<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-11932" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2024-02-28</depositionDate>
            <releaseDate>2026-03-06</releaseDate>
            <updateDate>2026-03-06</updateDate>
        </keyDates>
        <title>Cryo electron microscopy of Zaire Ebolavirus virus-like particles</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0002-0658-4663</authorORCID>
            <firstName>Takeshi</firstName>
            <lastName>Noda</lastName>
            <organization type="academic">Division of Ultrastructural Virology, Institute for Life and Medical Sciences</organization>
            <street>53 Shogoin-Kawahara Cho</street>
            <townOrCity>Sakyo</townOrCity>
            <stateOrProvince>Kyoto</stateOrProvince>
            <country>Japan</country>
            <postOrZipCode>6068397</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0002-2411-5473</authorORCID>
            <firstName>Yoko</firstName>
            <lastName>Fujita-Fujiharu</lastName>
            <organization type="academic">Division of Ultrastructural Virology, Institute for Life and Medical Sciences</organization>
            <street>53 Shogoin-Kawahara Cho</street>
            <townOrCity>Sakyo</townOrCity>
            <stateOrProvince>Kyoto</stateOrProvince>
            <country>Japan</country>
            <postOrZipCode>6068397</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0002-2411-5473">Fujita-Fujiharu Y</author>
            <author authorORCID="0000-0001-5671-8319">Hu S</author>
            <author authorORCID="0000-0002-6209-5960">Hirabayashi A</author>
            <author>Takamatsu Y</author>
            <author>Ng YN</author>
            <author>Houri K</author>
            <author authorORCID="0000-0002-8706-3113">Muramoto Y</author>
            <author authorORCID="0000-0003-4247-9008">Nakano M</author>
            <author authorORCID="0000-0001-6861-4840">Sugita Y</author>
            <author authorORCID="0000-0002-0658-4663">Noda T</author>
        </authorsList>
        <grantSupport>
            <grantReference>
                <fundingBody></fundingBody>
                <code></code>
                <country></country>
            </grantReference>
        </grantSupport>
        <datasetSize units="TB">1.4</datasetSize>
        <entryDOI>10.6019/EMPIAR-11932</entryDOI>
        <experimentType>EMDB</experimentType>
        <scale>molecule</scale>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-39081</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="true">
                    <author authorORCID="0000-0002-2411-5473" order="1">Fujita-Fujiharu Y</author>
                    <author authorORCID="0000-0001-5671-8319" order="2">Hu S</author>
                    <author authorORCID="0000-0002-6209-5960" order="3">Hirabayashi A</author>
                    <author order="4">Takamatsu Y</author>
                    <author order="5">Ng YN</author>
                    <author order="6">Houri K</author>
                    <author authorORCID="0000-0002-8706-3113" order="7">Muramoto Y</author>
                    <author authorORCID="0000-0003-4247-9008" order="8">Nakano M</author>
                    <author authorORCID="0000-0001-6861-4840" order="9">Sugita Y</author>
                    <author authorORCID="0000-0002-0658-4663" order="10">Noda T</author>
                    <title>Structural basis of Ebola virus nucleocapsid assembly and functions</title>
                    <journal>bioRxiv</journal>
                    <journalAbbreviation></journalAbbreviation>
                    <country></country>
                    <year>2024</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1101/2024.02.19.580633</externalReferences>
                </journalCitation>
            </universalCitation>
            <universalCitation>
                <journalCitation published="true" preprint="false">
                    <author authorORCID="0000-0002-2411-5473" order="1">Fujita-Fujiharu Y</author>
                    <author order="2">Hu S</author>
                    <author order="3">Hirabayashi A</author>
                    <author order="4">Takamatsu Y</author>
                    <author order="5">Ng YN</author>
                    <author order="6">Houri K</author>
                    <author authorORCID="0000-0002-8706-3113" order="7">Muramoto Y</author>
                    <author authorORCID="0000-0003-4247-9008" order="8">Nakano M</author>
                    <author authorORCID="0000-0001-6861-4840" order="9">Sugita Y</author>
                    <author authorORCID="0000-0002-0658-4663" order="10">Noda T</author>
                    <editor order="1"> </editor>
                    <title>Structural basis for Ebola virus nucleocapsid assembly and function regulated by VP24</title>
                    <journal>Nature communications</journal>
                    <journalAbbreviation>Nat Commun</journalAbbreviation>
                    <country></country>
                    <issue>1</issue>
                    <volume>16</volume>
                    <year>2025</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1038/s41467-025-57236-4</externalReferences>
                    <externalReferences type="pubmed">40064872</externalReferences>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>5897 K3 movies in TIFF</name>
        <directory>/data/220729_fujita/EBOV_VLP_frame</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>5897</numImagesOrTiltSeries>
        <framesPerImage>60</framesPerImage>
        <frameRange>
            <frameRangeMin>1</frameRangeMin>
            <frameRangeMax>60</frameRangeMax>
        </frameRange>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>4096</imageWidth>
            <pixelWidth>0.88</pixelWidth>
            <imageHeight>5760</imageHeight>
            <pixelHeight>0.88</pixelHeight>
        </dimensions>
        <details>- Please use gain.mrc as a gain reference without flipping or rotation.
- The dataset was collected with 3x3 image shifts. The shift direction
   is indicated in the file name (e.g. "X+0Y+0").
   Nine optics groups were created for data processing.
- The scope has a Cs corrector. The Cs after correction is 0.065 mm.
- The pixel size in the image header (0.87 Å/px) is not accurate.
   The right value is 0.88 Å/px.
- The flux is 1.0 e/Å^2/frame.</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
</entry>
