<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-12281" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2024-09-03</depositionDate>
            <releaseDate>2025-06-19</releaseDate>
            <updateDate>2025-06-19</updateDate>
        </keyDates>
        <title>Mouse TMEM63b in LMNG-CHS micelle</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0001-7463-8398</authorORCID>
            <firstName>Tomohiro</firstName>
            <lastName>Nishizawa</lastName>
            <organization type="academic">Graduate School of Medical Life Science, Yokohama City University</organization>
            <street>1-7-29 Suehiro-cho, Tsurumi-ku</street>
            <townOrCity>Yokohama</townOrCity>
            <stateOrProvince>Kanagawa</stateOrProvince>
            <country>Japan</country>
            <postOrZipCode>230-0045</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0003-2408-7668</authorORCID>
            <firstName>Katsumori</firstName>
            <lastName>Segawa</lastName>
            <organization type="academic">Department of Medical Chemistry, Tokyo Medical and Dental University</organization>
            <street>1-5-45 Yushima</street>
            <townOrCity>Bunkyo-ku</townOrCity>
            <stateOrProvince>Tokyo</stateOrProvince>
            <country>Japan</country>
            <postOrZipCode>113-8510</postOrZipCode>
        </principalInvestigator>
        <principalInvestigator private="true">
            <authorORCID>0000-0001-7463-8398</authorORCID>
            <firstName>Tomohiro</firstName>
            <lastName>Nishizawa</lastName>
            <organization type="academic">Graduate School of Medical Life Science, Yokohama City University</organization>
            <street>1-7-29 Suehiro-cho, Tsurumi-ku</street>
            <townOrCity>Yokohama</townOrCity>
            <stateOrProvince>Kanagawa</stateOrProvince>
            <country>Japan</country>
            <postOrZipCode>230-0045</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0002-3245-4600">Miyata Y</author>
            <author authorORCID="0000-0003-2028-244X">Takahashi K</author>
            <author authorORCID="0000-0002-1507-805X">Lee Y</author>
            <author authorORCID="0000-0003-2408-7668">Segawa K</author>
            <author authorORCID="0000-0001-7463-8398">Nishizawa T</author>
        </authorsList>
        <grantSupport>
            <grantReference>
                <fundingBody></fundingBody>
                <code></code>
                <country></country>
            </grantReference>
        </grantSupport>
        <datasetSize units="TB">1.2</datasetSize>
        <entryDOI>10.6019/EMPIAR-12281</entryDOI>
        <experimentType>EMDB</experimentType>
        <scale>molecule</scale>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-37501</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="false" preprint="false">
                    <author authorORCID="0000-0002-3245-4600" order="1">Miyata Y</author>
                    <author authorORCID="0000-0003-2028-244X" order="2">Takahashi K</author>
                    <author authorORCID="0000-0002-1507-805X" order="3">Lee Y</author>
                    <author order="4">Sultan C.S.</author>
                    <author order="5">Kuribayashi R</author>
                    <author order="6">Takahashi M</author>
                    <author order="7">Hata K</author>
                    <author order="8">Bamba T</author>
                    <author order="9">Izumi Y</author>
                    <author order="10">Liu K</author>
                    <author order="11">Uemura T</author>
                    <author order="12">Nomura N</author>
                    <author order="13">Iwata S</author>
                    <author order="14">Nagata S</author>
                    <author authorORCID="0000-0003-2408-7668" order="15">Segawa K</author>
                    <author authorORCID="0000-0001-7463-8398" order="16">Nishizawa T</author>
                    <title>Mouse TMEM63b in LMNG-CHS micelle</title>
                    <journal></journal>
                    <journalAbbreviation></journalAbbreviation>
                    <country></country>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Imageset_1 (mouseTMEM63b, 10 mg/mL, AU)</name>
        <directory>/data/20220725_TMEM63b_Krios/takahashi_2_Supervisor_20220725_183739</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>2790</numImagesOrTiltSeries>
        <framesPerImage>49</framesPerImage>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>5760</imageWidth>
            <pixelWidth>0.83</pixelWidth>
            <imageHeight>4092</imageHeight>
            <pixelHeight>0.83</pixelHeight>
        </dimensions>
        <details>- takahashi_2 (mouseTMEM63b, 10 mg/mL, AU) 
- 105k (0.83 A/px)
- K3, CDS, Counted SuperResolution - bin2  
- 7.5 e/px/sec x 4.7 sec (about 51 e/A^2)
- 49 frames (discard first frame)
- defocus -0.8 ~ -1.6 um  
- single shot/hole (beam diameter = 1.1 um)  
- Please use gain.(mrc|tiff) as a gain reference without flipping or rotation.</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
    <imageSet>
        <name>Imageset_2 (mouseTMEM63b, 5 mg/mL, Cu/Rh)</name>
        <directory>/data/20220725_TMEM63b_Krios/takahashi_4_Supervisor_20220725_180944</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>2090</numImagesOrTiltSeries>
        <framesPerImage>49</framesPerImage>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>5760</imageWidth>
            <pixelWidth>0.83</pixelWidth>
            <imageHeight>4092</imageHeight>
            <pixelHeight>0.83</pixelHeight>
        </dimensions>
        <details>- takahashi_4 (mouseTMEM63b, 5 mg/mL, Cu/Rh)
- 105k (0.83 A/px)
- K3, CDS, Counted SuperResolution - bin2  
- 7.5 e/px/sec x 4.7 sec (about 51 e/A^2)
- 49 frames (discard first frame)
- defocus -0.8 ~ -1.6 um  
- single shot/hole (beam diameter = 1.1 um) 
- Please use gain.(mrc|tiff) as a gain reference without flipping or rotation.</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
</entry>
