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        <keyDates>
            <depositionDate>2024-09-18</depositionDate>
            <releaseDate>2025-07-06</releaseDate>
            <updateDate>2025-07-06</updateDate>
        </keyDates>
        <title>Cryo-EM structure of the barley Yellow stripe 1 transporter</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0001-9285-1256</authorORCID>
            <firstName>Atsushi</firstName>
            <lastName>Yamagata</lastName>
            <organization type="academic">RIKEN Center for Biosystems Dynamics Research</organization>
            <street>1-7-22 Suehiro-cho</street>
            <townOrCity>Tsurumi-ku, Yokohama</townOrCity>
            <stateOrProvince>Kanagawa</stateOrProvince>
            <country>Japan</country>
            <postOrZipCode>230-0045</postOrZipCode>
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        <principalInvestigator private="true">
            <authorORCID>0000-0001-9285-1256</authorORCID>
            <firstName>Atsushi</firstName>
            <lastName>Yamagata</lastName>
            <organization type="academic">RIKEN Center for Biosystems Dynamics Research</organization>
            <street>1-7-22 Suehiro-cho</street>
            <townOrCity>Tsurumi-ku, Yokohama</townOrCity>
            <stateOrProvince>Kanagawa</stateOrProvince>
            <country>Japan</country>
            <postOrZipCode>230-0045</postOrZipCode>
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        <authorsList>
            <author authorORCID="0000-0001-9285-1256">Yamagata A</author>
            <author authorORCID="0000-0003-1891-2609">Murata Y</author>
            <author authorORCID="0000-0003-1548-5656">Namba K</author>
            <author authorORCID="0000-0002-7091-0646">Terada T</author>
            <author authorORCID="0000-0002-1241-1443">Fukai S</author>
            <author authorORCID="0000-0002-7997-2149">Shirouzu M</author>
        </authorsList>
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                <fundingBody></fundingBody>
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                <country></country>
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        <entryDOI>10.6019/EMPIAR-12332</entryDOI>
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        <scale>molecule</scale>
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    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-32765</emdbEntry>
            <emdbEntry>EMD-32766</emdbEntry>
            <emdbEntry>EMD-32767</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="false">
                    <author authorORCID="0000-0001-9285-1256" order="1">Yamagata A</author>
                    <author authorORCID="0000-0003-1891-2609" order="2">Murata Y</author>
                    <author authorORCID="0000-0003-1548-5656" order="3">Namba K</author>
                    <author authorORCID="0000-0002-7091-0646" order="4">Terada T</author>
                    <author authorORCID="0000-0002-1241-1443" order="5">Fukai S</author>
                    <author authorORCID="0000-0002-7997-2149" order="6">Shirouzu M</author>
                    <title>Uptake mechanism of iron-phytosiderophore from the soil based on the structure of yellow stripe transporter</title>
                    <journal>Nature communications</journal>
                    <journalAbbreviation>Nat Commun</journalAbbreviation>
                    <country></country>
                    <issue>1</issue>
                    <volume>13</volume>
                    <year>2022</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1038/s41467-022-34930-1</externalReferences>
                    <externalReferences type="pubmed">36424382</externalReferences>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>[EMD-32765 / 7WSR] Cryo-EM structure of the barley Yellow stripe 1 transporter</name>
        <directory>/data/apo</directory>
        <category>micrographs - multiframe</category>
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        <voxelType>UNSIGNED BYTE</voxelType>
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            <pixelWidth>0.8285</pixelWidth>
            <imageHeight>4092</imageHeight>
            <pixelHeight>0.8285</pixelHeight>
        </dimensions>
        <details>- Microscope: FEI TITAN Krios
- Detector: Gatan K3 BIOQUANTUM
- Acceleration voltage (kV): 300
- The pixel size in the image header (1 Å/px) is wrong. 0.8285 Å/px is the calibrated value.
- Spherical aberration (Cs) : 2.7
- Nominal Defocus (μm): 0.8 - 2.5 
- Average electron dose per image (e-/A2): 50.3
- Number of frames per image: 50
- Please use 'gain.mrc' as a gain reference without rotation and y-flipping.</details>
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        <name>[EMD-32766 / 7WST] Cryo-EM structure of the barley Yellow stripe 1 transporter in complex with Fe(III)-DMA</name>
        <directory>/data/FeDMA</directory>
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            <imageHeight>4092</imageHeight>
            <pixelHeight>0.8285</pixelHeight>
        </dimensions>
        <details>- Microscope: FEI TITAN Krios
- Detector: Gatan K3 BIOQUANTUM
- Acceleration voltage (kV): 300
- The pixel size in the image header (1 Å/px) is wrong. 0.8285 Å/px is the calibrated value.
- Spherical aberration (Cs) : 2.7
- Nominal Defocus (μm): 0.6 - 2.5
- Average electron dose per image (e-/A2): 51.4
- Number of frames per image: 48
- Please use 'gain.mrc' as a gain reference without rotation and y-flipping.</details>
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    <imageSet>
        <name>[EMD-32767 / 7WSU] Cryo-EM structure of the barley Yellow stripe 1 transporter in complex with Fe(III)-PDMA</name>
        <directory>/data/FePDMA</directory>
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            <imageWidth>5760</imageWidth>
            <pixelWidth>0.8285</pixelWidth>
            <imageHeight>4092</imageHeight>
            <pixelHeight>0.8285</pixelHeight>
        </dimensions>
        <details>- Microscope: FEI TITAN Krios
- Detector: Gatan K3 BIOQUANTUM
- Acceleration voltage (kV): 300
- The pixel size in the image header (1 Å/px) is wrong. 0.8285 Å/px is the calibrated value.
- Spherical aberration (Cs) : 2.7
- Nominal Defocus (μm): 0.8 - 2.5
- Average electron dose per image (e-/A2): 49.8
- Number of frames per image: 48
- Please use 'gain.mrc' as a gain reference without rotation and y-flipping.</details>
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