<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-12716" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2024-10-16</depositionDate>
            <releaseDate>2026-03-30</releaseDate>
            <updateDate>2026-03-30</updateDate>
        </keyDates>
        <title>Borna disease virus 1 nucleoprotein complexes</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0001-6861-4840</authorORCID>
            <firstName>Yukihiko</firstName>
            <lastName>Sugita</lastName>
            <organization type="academic">Division of Ultrastructural Virology, Institute for Life and Medical Sciences</organization>
            <street>53 Shogoin-Kawahara Cho</street>
            <townOrCity>Sakyo</townOrCity>
            <stateOrProvince>Kyoto</stateOrProvince>
            <country>Japan</country>
            <postOrZipCode>6068397</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0001-6861-4840</authorORCID>
            <firstName>Yukihiko</firstName>
            <lastName>Sugita</lastName>
            <organization type="academic">Division of Ultrastructural Virology, Institute for Life and Medical Sciences</organization>
            <street>53 Shogoin-Kawahara Cho</street>
            <townOrCity>Sakyo</townOrCity>
            <stateOrProvince>Kyoto</stateOrProvince>
            <country>Japan</country>
            <postOrZipCode>6068397</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0001-6861-4840">Sugita Y</author>
            <author authorORCID="0000-0001-8571-080X">Hirai Y</author>
            <author authorORCID="0009-0002-1835-3253">Goto SH</author>
            <author authorORCID="0000-0003-4682-7698">Horie M</author>
        </authorsList>
        <grantSupport>
            <grantReference>
                <fundingBody></fundingBody>
                <code></code>
                <country></country>
            </grantReference>
        </grantSupport>
        <datasetSize units="TB">8.0</datasetSize>
        <entryDOI>10.6019/EMPIAR-12716</entryDOI>
        <experimentType>EMDB</experimentType>
        <scale>molecule</scale>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-61914</emdbEntry>
            <emdbEntry>EMD-61915</emdbEntry>
            <emdbEntry>EMD-61916</emdbEntry>
            <emdbEntry>EMD-61917</emdbEntry>
            <emdbEntry>EMD-61918</emdbEntry>
            <emdbEntry>EMD-61919</emdbEntry>
            <emdbEntry>EMD-61920</emdbEntry>
            <emdbEntry>EMD-61921</emdbEntry>
            <emdbEntry>EMD-61922</emdbEntry>
            <emdbEntry>EMD-61923</emdbEntry>
            <emdbEntry>EMD-61924</emdbEntry>
            <emdbEntry>EMD-61925</emdbEntry>
            <emdbEntry>EMD-61926</emdbEntry>
            <emdbEntry>EMD-61927</emdbEntry>
            <emdbEntry>EMD-61928</emdbEntry>
            <emdbEntry>EMD-61929</emdbEntry>
            <emdbEntry>EMD-61930</emdbEntry>
            <emdbEntry>EMD-61931</emdbEntry>
            <emdbEntry>EMD-61932</emdbEntry>
            <emdbEntry>EMD-61933</emdbEntry>
            <emdbEntry>EMD-61934</emdbEntry>
            <emdbEntry>EMD-61935</emdbEntry>
            <emdbEntry>EMD-61936</emdbEntry>
            <emdbEntry>EMD-61937</emdbEntry>
            <emdbEntry>EMD-61938</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="false" preprint="true">
                    <author authorORCID="0000-0001-6861-4840" order="1">Sugita Y</author>
                    <author authorORCID="0000-0001-8571-080X" order="2">Hirai Y</author>
                    <author authorORCID="0009-0002-1835-3253" order="3">Goto SH</author>
                    <author authorORCID="0000-0003-0405-7103" order="4">Tomonaga K</author>
                    <author authorORCID="0000-0002-0658-4663" order="5">Noda T</author>
                    <author authorORCID="0000-0003-4682-7698" order="6">Horie M</author>
                    <title>Borna disease virus 1 nucleoprotein complexes</title>
                    <journal></journal>
                    <journalAbbreviation></journalAbbreviation>
                    <country></country>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>29,340 K3 movies in TIFF (nucleoprotein wild-type)</name>
        <directory>/data/BoDV-1_N_wt</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>29340</numImagesOrTiltSeries>
        <framesPerImage>60</framesPerImage>
        <frameRange>
            <frameRangeMin>1</frameRangeMin>
            <frameRangeMax>60</frameRangeMax>
        </frameRange>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>5760</imageWidth>
            <pixelWidth>0.88</pixelWidth>
            <imageHeight>4092</imageHeight>
            <pixelHeight>0.88</pixelHeight>
        </dimensions>
        <details>- EMD-61914 EMD-61915 EMD-61916 EMD-61917 EMD-61918 EMD-61919 EMD-61920 EMD-61921 EMD-61922 EMD-61923 EMD-61924 EMD-61925 EMD-61926 EMD-61927 EMD-61928
- Please use gain.mrc for each group of frames as a gain reference without flipping or rotation.
- The dataset was collected using 2 exposures per hole with a 3x3 image shift pattern.
- The shift group is indicated by a four-digit number in the file name (e.g., "_0000_").
- Data processing was done with a single optics group.
- The scope has a Cs corrector. The Cs after correction is 0.056 mm. 
- The flux is 0.67 e/Å^2/frame.</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
    <imageSet>
        <name>5,733 Falcon4 movies in TIFF (nucleoprotein K164A mutant)</name>
        <directory>/data/BoDV-1_N_mut</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>5733</numImagesOrTiltSeries>
        <framesPerImage>49</framesPerImage>
        <frameRange>
            <frameRangeMin>1</frameRangeMin>
            <frameRangeMax>49</frameRangeMax>
        </frameRange>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>4096</imageWidth>
            <pixelWidth>0.88</pixelWidth>
            <imageHeight>4096</imageHeight>
            <pixelHeight>0.88</pixelHeight>
        </dimensions>
        <details>- EMD-61929 EMD-61930 EMD-61931 EMD-61932 EMD-61933 EMD-61934 EMD-61935 EMD-61936 EMD-61937 EMD-61938
- Please use gain.mrc for frames as a gain reference without flipping or rotation.
- The dataset was collected using "Aberration-free image shift" scheme.
- Data processing was done with a single optics group.
- The Cs is 2.7 mm. 
- The pixel size in the image header (1.00 Å/px) is not correct.
- The correct value is 0.724 Å/px.
- The flux is 0.88 e/Å^2/frame.</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
</entry>
