<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-10064" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2016-06-15</depositionDate>
            <releaseDate>2016-08-15</releaseDate>
            <updateDate>2019-08-30</updateDate>
        </keyDates>
        <title>VPP subtomogram averaging</title>
        <correspondingAuthor private="true">
            <firstName>Radostin</firstName>
            <lastName>Danev</lastName>
            <organization type="academic">Max Planck Institute of Biochemistry</organization>
            <street>Am klopferspitz 18</street>
            <townOrCity>Martinsried</townOrCity>
            <country>Germany</country>
            <postOrZipCode>82152</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <firstName>Radostin</firstName>
            <lastName>Danev</lastName>
            <organization type="academic">Max Planck Institute of Biochemistry</organization>
            <street>Am klopferspitz 18</street>
            <townOrCity>Martinsried</townOrCity>
            <country>Germany</country>
            <postOrZipCode>82152</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author>Khoshouei M</author>
            <author>Pfeffer S</author>
            <author>Baumeister W</author>
            <author>Foerster F</author>
            <author>Danev R</author>
        </authorsList>
        <datasetSize units="GB">33.9</datasetSize>
        <entryDOI>10.6019/EMPIAR-10064</entryDOI>
        <experimentType>EMDB</experimentType>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-3418</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="false">
                    <author order="1">Khoshouei M</author>
                    <author authorORCID="0000-0001-5843-2795" order="2">Pfeffer S</author>
                    <author order="3">Baumeister W</author>
                    <author order="4">Förster F</author>
                    <author authorORCID="0000-0001-6406-8993" order="5">Danev R</author>
                    <title>Subtomogram analysis using the Volta phase plate</title>
                    <journal>Journal of structural biology</journal>
                    <journalAbbreviation>J. Struct. Biol.</journalAbbreviation>
                    <country></country>
                    <issue>2</issue>
                    <volume>197</volume>
                    <firstPage>94</firstPage>
                    <lastPage>101</lastPage>
                    <year>2016</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1016/j.jsb.2016.05.009</externalReferences>
                    <externalReferences type="pubmed">27235783</externalReferences>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>VPP_Ribosome, CTEM_Ribosome</name>
        <directory>/data</directory>
        <category>class averages</category>
        <headerFormat>MRC</headerFormat>
        <dataFormat>MRC</dataFormat>
        <numImagesOrTiltSeries>11</numImagesOrTiltSeries>
        <framesPerImage>5</framesPerImage>
        <frameRange>
            <frameRangeMin>1</frameRangeMin>
            <frameRangeMax>5</frameRangeMax>
        </frameRange>
        <voxelType>32 BIT FLOAT</voxelType>
        <dimensions>
            <imageWidth>3710</imageWidth>
            <pixelWidth>2.62</pixelWidth>
            <imageHeight>3710</imageHeight>
            <pixelHeight>2.62</pixelHeight>
        </dimensions>
        <details>CTEM_tomo--&gt;Conventional data set with one defocus value. 
mixedCTEM_tomo--&gt;Conventional data set with various defocus values. 
VPP_tomo--&gt;VPP data set.  

The tilt series contain 61 images but each image is the sum of 5 sub-frames.</details>
        <segmentationList/>
    </imageSet>
</entry>
