Unsupervised single-particle deep classification via statistical manifold learning

REL 2016-07-06 2016-07-06 2017-01-03 Unsupervised single-particle deep classification via statistical manifold learning Youdong Mao Dana-Farber Cancer Institute 46 S Huntington Ave, Apt #12 Jamaica Plain MA United States 02130-4751 Youdong Mao Dana-Farber Cancer Institute 450 Brookline Ave Boston MA United States 02215 Youdong Mao Dana-Farber Cancer Institute 46 S Huntington Ave, Apt #12 Jamaica Plain MA United States 02130-4751 Wu J Ma YB Congdon C Brett B Chen S Xu Y Ouyang Q Mao Y 1 2016-07-07 REL

Restructured the data into four dataset directories.

2 2016-07-20 REL

Added pixel sizes information.

3 2017-01-03 REL

The data has been re-uploaded due to reports of damaged/corrupted files. Added the citation information.

28.2 10.6019/EMPIAR-10069 EMDB Wu J Ma YB Congdon C Brett B Chen S Ouyang Q Mao Y Unsupervised single-particle deep classification via statistical manifold learning arXiv arXiv United States 2016 English

https://arxiv.org/abs/1604.04539

Unaligned particle stacks from sub-frame drift-corrected micrographs. Set 1 /data/set1 picked particles - multiframe - processed MRC MRC 16306 1 32 BIT FLOAT 250 0.86 250 0.86

Dataset1: 250 x 250 box size, 16306-particle dataset of inflammasome. These datasets were used for benchmarking the relevant algorithms for image classification.

Unaligned particle stacks from sub-frame drift-corrected micrographs. Set 2 /data/set2 picked particles - multiframe - processed MRC MRC 35407 1 32 BIT FLOAT 160 0.98 160 0.98

Dataset2: 160 x 160 box size, 35407-particle dataset of free RP complex. These datasets were used for benchmarking the relevant algorithms for image classification.

Unaligned particle stacks from sub-frame drift-corrected micrographs. Set 3 /data/set3 picked particles - multiframe - processed MRC MRC 96488 1 32 BIT FLOAT 180 0.86 180 0.86

Dataset3: 180 x 180 box size, 96488-particle dataset of RP-CP complex. These datasets were used for benchmarking the relevant algorithms for image classification.

Unaligned particle stacks from sub-frame drift-corrected micrographs. Set 4 /data/set4 picked particles - multiframe - processed MRC MRC 57001 1 32 BIT FLOAT 160 0.98 160 0.98

Dataset4 denotes the 160 x 160 box size, 57001-particle dataset of free RP complex. These datasets were used for benchmarking the relevant algorithms for image classification.