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            <depositionDate>2020-09-01</depositionDate>
            <releaseDate>2020-11-11</releaseDate>
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        <title>Cryo-EM structure of immunodominant protein P1 from human pathogen Mycoplasma pneumoniae on graphene oxide grid</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0002-7478-7390</authorORCID>
            <firstName>Makoto</firstName>
            <lastName>Miyata</lastName>
            <organization type="academic">Graduate School of Science, Osaka City University</organization>
            <townOrCity>Osaka</townOrCity>
            <country>Japan</country>
            <postOrZipCode>558-8585</postOrZipCode>
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            <authorORCID>0000-0003-2911-5875</authorORCID>
            <firstName>Keiichi</firstName>
            <lastName>Namba</lastName>
            <organization type="academic">Graduate School of Frontier Biosciences, Osaka University</organization>
            <townOrCity>Osaka</townOrCity>
            <country>Japan</country>
            <postOrZipCode>565-0871</postOrZipCode>
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        <authorsList>
            <author authorORCID="0000-0002-4478-0155">Vizarraga D</author>
            <author authorORCID="0000-0002-7380-0127">Kawamoto A</author>
            <author>Matsumoto U</author>
            <author authorORCID="0000-0002-1710-061X">Illanes R</author>
            <author>Pérez-Luque R</author>
            <author>Martín J</author>
            <author>Mazzolini R</author>
            <author>Bierge P</author>
            <author authorORCID="0000-0003-3561-630X">Pich OQ</author>
            <author>Espasa M</author>
            <author>Sanfeliu I</author>
            <author>Esperalba J</author>
            <author>Fernández-Huerta M</author>
            <author>Scheffer MP</author>
            <author>Pinyol J</author>
            <author authorORCID="0000-0002-8067-6611">Frangakis AS</author>
            <author>Lluch-Senar M</author>
            <author authorORCID="0000-0002-4880-410X">Mori S</author>
            <author>Shibayama K</author>
            <author authorORCID="0000-0002-3198-4263">Kenri T</author>
            <author authorORCID="0000-0002-8879-6685">Kato T</author>
            <author authorORCID="0000-0003-2911-5875">Namba K</author>
            <author>Fita I</author>
            <author authorORCID="0000-0002-7478-7390">Miyata M</author>
            <author authorORCID="0000-0002-1971-5335">Aparicio D</author>
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                <journalCitation published="true" preprint="false">
                    <author authorORCID="0000-0002-4478-0155" order="1">Vizarraga D</author>
                    <author authorORCID="0000-0002-7380-0127" order="2">Kawamoto A</author>
                    <author order="3">Matsumoto U</author>
                    <author authorORCID="0000-0002-1710-061X" order="4">Illanes R</author>
                    <author order="5">Pérez-Luque R</author>
                    <author order="6">Martín J</author>
                    <author order="7">Mazzolini R</author>
                    <author order="8">Bierge P</author>
                    <author authorORCID="0000-0003-3561-630X" order="9">Pich OQ</author>
                    <author order="10">Espasa M</author>
                    <author order="11">Sanfeliu I</author>
                    <author order="12">Esperalba J</author>
                    <author order="13">Fernández-Huerta M</author>
                    <author order="14">Scheffer MP</author>
                    <author order="15">Pinyol J</author>
                    <author authorORCID="0000-0002-8067-6611" order="16">Frangakis AS</author>
                    <author order="17">Lluch-Senar M</author>
                    <author authorORCID="0000-0002-4880-410X" order="18">Mori S</author>
                    <author order="19">Shibayama K</author>
                    <author authorORCID="0000-0002-3198-4263" order="20">Kenri T</author>
                    <author authorORCID="0000-0002-8879-6685" order="21">Kato T</author>
                    <author authorORCID="0000-0003-2911-5875" order="22">Namba K</author>
                    <author order="23">Fita I</author>
                    <author authorORCID="0000-0002-7478-7390" order="24">Miyata M</author>
                    <author authorORCID="0000-0002-1971-5335" order="25">Aparicio D</author>
                    <title>Immunodominant proteins P1 and P40/P90 from human pathogen Mycoplasma pneumoniae</title>
                    <journal>Nature communications</journal>
                    <journalAbbreviation>Nat Commun</journalAbbreviation>
                    <country></country>
                    <issue>1</issue>
                    <volume>11</volume>
                    <year>2020</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1038/s41467-020-18777-y</externalReferences>
                    <externalReferences type="pubmed">33057023</externalReferences>
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    <imageSet>
        <name>Unaligned 136-frame movies of human pathogen Mycoplasma pneumoniae P1</name>
        <directory>/data/P1-not-on-GO</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>512</numImagesOrTiltSeries>
        <framesPerImage>136</framesPerImage>
        <voxelType>SIGNED 16 BIT INTEGER</voxelType>
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            <imageHeight>4096</imageHeight>
            <pixelHeight>0.88</pixelHeight>
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        <details>human pathogen Mycoplasma pneumoniae P1(particles have preferred orientations). Cryo-EM imaging was obtained using a Titan Krios operating at 300 kV acceleration voltage and equipped with a Cs corrector and a Falcon III direct electron detector.  A total of 512 movies were obtained in the electron counting mode with a physical pixel size of 0.88 Å/pixel and total dose of 60 e/Å2 with 63.2 s exposure time. The data were automatically collected using EPU software with a defocus range of -1.25 to -2.75 µm and were fractionated into 136 movie frames.</details>
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        <name>Unaligned 78-frame movies of human pathogen Mycoplasma pneumoniae P1</name>
        <directory>/data/P1-on-GO</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>5469</numImagesOrTiltSeries>
        <framesPerImage>78</framesPerImage>
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        <dimensions>
            <imageWidth>4096</imageWidth>
            <pixelWidth>0.69</pixelWidth>
            <imageHeight>4096</imageHeight>
            <pixelHeight>0.69</pixelHeight>
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        <details>human pathogen Mycoplasma pneumoniae P1 on graphene oxide grid. Cryo-EM imaging was obtained using a Titan Krios operating at 300 kV acceleration voltage and equipped with a Cs corrector and a Falcon III direct electron detector.  A total of 5469 movies were obtained in the electron counting mode with a physical pixel size of 0.69 Å/pixel and total dose of 60 e/Å2 with 36.33 s exposure time. The data were automatically collected using EPU software with a defocus range of -0.75 to -2.75 µm and were fractionated into 78 movie frames.</details>
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