<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-10839" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2021-10-29</depositionDate>
            <releaseDate>2021-11-26</releaseDate>
            <updateDate>2022-01-07</updateDate>
        </keyDates>
        <title>Reconstructed cryo soft X-ray tomography dataset of a treated NIH-3T3 cell with corresponding correlated cryo-3D-SIM channels</title>
        <correspondingAuthor>
            <authorORCID>0000-0002-9395-8108</authorORCID>
            <firstName>Johannes</firstName>
            <lastName>Groen</lastName>
            <organization type="academic">Mistral Beamline, Alba Synchrotron</organization>
            <street>Carrer de la Llum 2-26</street>
            <townOrCity>Cerdanyola del Valles</townOrCity>
            <stateOrProvince>Barcelona</stateOrProvince>
            <country>Spain</country>
            <postOrZipCode>08290</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator>
            <authorORCID>0000-0001-7626-5935</authorORCID>
            <firstName>Eva</firstName>
            <lastName>Pereiro</lastName>
            <organization type="academic">Mistral Beamline Alba Synchrotron</organization>
            <street>Carrer de la Llum 2-26</street>
            <townOrCity>Cerdanyola del Valles</townOrCity>
            <stateOrProvince>Barcelona</stateOrProvince>
            <country>Spain</country>
            <postOrZipCode>08290</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0002-9395-8108">Groen J</author>
            <author authorORCID="0000-0001-7626-5935">Pereiro E</author>
        </authorsList>
        <datasetSize>10.1</datasetSize>
        <entryDOI>10.6019/EMPIAR-10839</entryDOI>
        <experimentType>CLXM</experimentType>
    </admin>
    <crossReferences>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="false">
                    <author authorORCID="0000-0002-9395-8108" order="1">Groen J</author>
                    <author authorORCID="0000-0001-7274-7021" order="2">Palanca A</author>
                    <author order="3">Aires A</author>
                    <author order="4">Conesa JJ</author>
                    <author order="5">Maestro D</author>
                    <author order="6">Rehbein S</author>
                    <author order="7">Harkiolaki M</author>
                    <author authorORCID="0000-0003-4588-9598" order="8">Villar AV</author>
                    <author authorORCID="0000-0002-5331-114X" order="9">Cortajarena AL</author>
                    <author authorORCID="0000-0001-7626-5935" order="10">Pereiro E</author>
                    <title>Correlative 3D cryo X-ray imaging reveals intracellular location and effect of designed antifibrotic protein-nanomaterial hybrids</title>
                    <journal>Chemical science</journal>
                    <journalAbbreviation>Chem Sci</journalAbbreviation>
                    <country></country>
                    <issue>45</issue>
                    <volume>12</volume>
                    <firstPage>15090</firstPage>
                    <lastPage>15103</lastPage>
                    <year>2021</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1039/d1sc04183e</externalReferences>
                    <externalReferences type="pubmed">34909150</externalReferences>
                    <details>The full 3D correlation of a NIH-3T3 cell  treated with a protein-nanomaterial, measured with cryo-3D-SIM and cryo soft X-ray tomography. The protein-nanomaterial is unambiguously located in specific multivesicular bodies.</details>
                </journalCitation>
            </universalCitation>
        </citationList>
        <relatedBioStudiesEntries>
            <bioStudiesEntry>S-BSST728</bioStudiesEntry>
        </relatedBioStudiesEntries>
    </crossReferences>
    <imageSet>
        <name>Stitched and correlated 3D reconstruction of a NIH-3T3 cell</name>
        <directory>/data</directory>
        <category>reconstructed volumes</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>300</numImagesOrTiltSeries>
        <framesPerImage>1</framesPerImage>
        <voxelType>32 BIT FLOAT</voxelType>
        <dimensions>
            <imageWidth>1890</imageWidth>
            <pixelWidth>variable</pixelWidth>
            <imageHeight>1590</imageHeight>
            <pixelHeight>variable</pixelHeight>
        </dimensions>
        <details>Volume contains 3 channel, 2 of which show the fluorescent data that has been correlated to a SXT stitched tomogaphic reconstruction dataset (also available in the associated Biostudies repository).  Voxelsize: 20 x 20 x 10 nm</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
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