<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-12146" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2024-06-20</depositionDate>
            <releaseDate>2024-09-26</releaseDate>
            <updateDate>2024-09-26</updateDate>
        </keyDates>
        <title>Cryo-EM structure of uropathogenic Escherichia coli CysK:CdiA:tRNA complex</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0002-7374-3898</authorORCID>
            <firstName>Kozo</firstName>
            <lastName>Tomita</lastName>
            <organization type="academic">Graduate School of Frontier Sciences, The University of Tokyo</organization>
            <street>5-1-5, Kashiwa-no-ha</street>
            <townOrCity>Kaashiwa City</townOrCity>
            <stateOrProvince>Chiba</stateOrProvince>
            <country>Japan</country>
            <postOrZipCode>277-8562</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0002-7374-3898</authorORCID>
            <firstName>Kozo</firstName>
            <lastName>Tomita</lastName>
            <organization type="academic">Graduate School of Frontier Sciences, The University of Tokyo</organization>
            <street>5-1-5, Kashiwa-no-ha</street>
            <townOrCity>Kaashiwa City</townOrCity>
            <stateOrProvince>Chiba</stateOrProvince>
            <country>Japan</country>
            <postOrZipCode>277-8562</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0009-0009-3834-1306">Feng Z</author>
            <author authorORCID="0000-0001-5512-026X">Yashiro Y</author>
            <author authorORCID="0000-0002-7374-3898">Tomita K</author>
        </authorsList>
        <grantSupport>
            <grantReference>
                <fundingBody></fundingBody>
                <code></code>
                <country></country>
            </grantReference>
        </grantSupport>
        <datasetSize units="TB">1.5</datasetSize>
        <entryDOI>10.6019/EMPIAR-12146</entryDOI>
        <experimentType>EMDB</experimentType>
        <scale>molecule</scale>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-60561</emdbEntry>
            <emdbEntry>EMD-60562</emdbEntry>
            <emdbEntry>EMD-60563</emdbEntry>
            <emdbEntry>EMD-60564</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="false">
                    <author authorORCID="0009-0009-3834-1306" order="1">Feng Z</author>
                    <author authorORCID="0000-0001-5512-026X" order="2">Yashiro Y</author>
                    <author authorORCID="0000-0002-7374-3898" order="3">Tomita K</author>
                    <title>Mechanism of activation of contact-dependent growth inhibition tRNase toxin by the amino acid biogenesis factor CysK in the bacterial competition system</title>
                    <journal>Nucleic acids research</journal>
                    <journalAbbreviation>Nucleic Acids Res</journalAbbreviation>
                    <country></country>
                    <year>2024</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1093/nar/gkae735</externalReferences>
                    <externalReferences type="pubmed">39228374</externalReferences>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Imageset</name>
        <directory>/data/20230413_Tomita_CysK_1_data</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>7044</numImagesOrTiltSeries>
        <framesPerImage>50</framesPerImage>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>5760</imageWidth>
            <pixelWidth>0.83</pixelWidth>
            <imageHeight>4092</imageHeight>
            <pixelHeight>0.83</pixelHeight>
        </dimensions>
        <details>- Microscope: FEI TITAN Krios
- Acceleration voltage (kV): 300
- Pixel size (Å/pix): 0.83
- Spherical aberration (Cs) : 2.7
- Nominal Defocus (nm): -800 to -1800
- Detector: Gatan K3 BIOQUANTUM
- Average electron dose per image (e-/A2): 50
- Number of frames per image: 50
- Please use gain.mrc as a gain reference.
- In CryoSPARC, select "flip gain ref in Y".</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
</entry>
